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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6042244 chr20:1413092 C/T FKBP1AP1 chr19:58337829-58338146:- 0.41 7.35 8.81E-13 Box Plot
THCA rs6042268 chr20:1415793 A/G FKBP1AP1 chr19:58337829-58338146:- 0.4 7.05 6.37E-12 Box Plot
THCA rs6042292 chr20:1419199 A/T FKBP1AP1 chr19:58337829-58338146:- 0.43 7.67 9.76E-14 Box Plot
THCA rs60451660 chr10:51823050 CT/C FAM21B chr10:47894023-47949412:+ 0.58 7.61 1.46E-13 Box Plot
THCA rs60453957 chr2:101132747 G/A LOC285359 chr3:101431278-101432259:+ 0.3 6.05 2.9E-9 Box Plot
THCA rs60458183 chr14:66727696 G/A ATP6V1D chr14:67761088-67826982:- 0.31 6.41 3.46E-10 Box Plot
THCA rs60465725 chr2:132191928 G/C CCDC74B chr2:130896860-130902707:- 0.36 6.55 1.51E-10 Box Plot
THCA rs60467718 chr14:66746870 T/C ATP6V1D chr14:67761088-67826982:- 0.28 6.22 1.08E-9 Box Plot
THCA rs60485484 chr14:39885460 G/GTT LOC647288 chr13:75811890-75814517:- -0.48 -8.61 1.09E-16 Box Plot
THCA rs60495759 chr8:11789025 C/A SGK223 chr8:8175258-8244008:- -0.45 -8.47 3.13E-16 Box Plot
THCA rs60533166 chr10:51818371 A/C FAM21B chr10:47894023-47949412:+ 0.48 7.61 1.49E-13 Box Plot
THCA rs60539478 chr10:51823801 C/G FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs60566978 chr21:18947362 CATACATAA/C CXADRP3 chr18:14477954-14499277:- -0.59 -9.09 2.71E-18 Box Plot
THCA rs60582951 chr8:9863041 A/AT SGK223 chr8:8175258-8244008:- 0.33 5.97 4.74E-9 Box Plot
THCA rs60618856 chr5:49526624 C/CA LOC647121 chr1:121260910-121313686:+ -0.36 -7.64 1.16E-13 Box Plot